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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3747334_3747420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747334 - 3747420

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCGCCTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCTTGCTGACCG

Flanking Amino Acid:

LQREHGLGKAAVVKALEQLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

68.6

0.42

0.8

30.6

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

44.8

-0.5

2.2

51.42

48.7

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774