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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3747511_3747598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747511 - 3747598

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

TCCCGCTGAGCT

Flanking Amino Acid:

GKQKVYFADQEQLPAASDAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

74.4

0.55

0.8

64.5

30.9

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

44.9

-0.3

2.1

62.08

47.4

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774