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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3747958_3748191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747958 - 3748191

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGAGG

5'SS Class:

major

3'SS Sequence:

TTGCTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTGTTCTCACTT

Flanking Amino Acid:

NHVTPEEKEKVCSEQRLYCK

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

62.8

43.2

Major BPS

0.87

0.8

85.6

Major PPT

75.8

0.58

37.3

Minor 5ss

25.6

-2.8

30.6

42.9

Minor BPS

55.2

0.24

1.8

75.27

42.3

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774