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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3748246_3748691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3748246 - 3748691

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TGAGCCTGACCC

Flanking Amino Acid:

CKEWRKRKRMATELLDAILE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.6

41.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

72.6

0.51

65.7

Minor 5ss

35.5

-1.7

3.4

47.8

42.4

Minor BPS

49.1

-0

1.9

61.02

43.7

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774