Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3748752_3748835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3748752 - 3748835

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TGTCCTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTGTCCTCACAC

Flanking Amino Acid:

GYPKSKKQFFEEVGIETDED

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

64.5

39.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

71.2

0.48

0.9

65.3

35.3

Minor 5ss

38.1

-1.3

2.9

52.1

38.4

Minor BPS

52.5

0.06

67.95

43.4

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774