Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3751712_3752001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3751712 - 3752001

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

TGGCTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

GTTTATTCACCC

Flanking Amino Acid:

KEVMALKIMKVNYEQIVKAH

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

67.1

Major BPS

82.3

0.8

83.6

25.8

Major PPT

68.6

0.42

1.1

61.1

44.6

Minor 5ss

40.7

-1

2.9

49.4

46.6

Minor BPS

48.1

-0.1

64.34

41.1

Associated Gene:

Gene:

MLX

Ensembl Gene ID:

ENSAPLG00000003549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003625

3751075 - 3754015

2941