Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3757361_3757436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3757361 - 3757436

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

AAACCCCTGAGT

Flanking Amino Acid:

VWTAVIPEEEAVKRIMDRDG

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

61.9

0.27

0.9

50.9

39.3

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

46.3

-0.2

1.9

61.85

41.4

Associated Gene:

Gene:

COASY

Ensembl Gene ID:

ENSAPLG00000029143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030909

3756754 - 3760995

4242

ENSAPLT00000030544

3756754 - 3760995

4242