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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3758259_3758312_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3758259 - 3758312

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTCGGTGA

5'SS Class:

weak_major

3'SS Sequence:

GGTGCCGCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGCAC

U12 Branch Point Sequence:

TGCACCGGGAGC

Flanking Amino Acid:

VRGLGRVASGPRLLLRVPRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.4

44.5

43.1

Major BPS

-0.3

1.5

44.3

Major PPT

59.1

0.21

50.5

39.3

Minor 5ss

20.6

-3.4

3.8

21.2

37.4

Minor BPS

38.9

-0.8

2.3

47.77

Associated Gene:

Gene:

COASY

Ensembl Gene ID:

ENSAPLG00000029143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045977

3754621 - 3758366

3746