Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3759716_3759788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3759716 - 3759788

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAATTTTG

5'SS Class:

major

3'SS Sequence:

CTTGTCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

GTGGGCTCAGTG

Flanking Amino Acid:

EAVNKKRLENGLAALELFEI

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.3

71.6

40.9

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

70.5

0.46

66.1

35.8

Minor 5ss

45.3

-0.5

2.8

57.6

40.4

Minor BPS

38.6

-1

2.1

39.85

44.4

Associated Gene:

Gene:

COASY

Ensembl Gene ID:

ENSAPLG00000029143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030909

3756754 - 3760995

4242

ENSAPLT00000030544

3756754 - 3760995

4242