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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3761820_3762033_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3761820 - 3762033

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGATGG

5'SS Class:

major

3'SS Sequence:

TGTGCGGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CACTGCTGAGCC

Flanking Amino Acid:

AAQEVEEVLQVFLEAISTPC

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

59.4

42.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

58.8

0.2

1.2

Minor 5ss

30.5

-2.2

3.2

46.9

Minor BPS

44.3

-0.4

2.1

52.14

44.9

Associated Gene:

Gene:

HSD17B1

Ensembl Gene ID:

ENSAPLG00000016530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027012

3761649 - 3763302

1654