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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3762218_3762315_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3762218 - 3762315

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CTCCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CCCCCCCCATTT

Flanking Amino Acid:

LAIVLRPFNIHVTLVECGPV

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

48.9

-0

1.3

39.1

Major PPT

77.4

0.62

0.7

71.8

26.5

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

39.6

-0.7

1.9

49.84

44.1

Associated Gene:

Gene:

HSD17B1

Ensembl Gene ID:

ENSAPLG00000016530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027012

3761649 - 3763302

1654