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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3785990_3786077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3785990 - 3786077

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GGCAGGGTGACG

Flanking Amino Acid:

QAQLFLHISLGSSPVHATEG

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

59.7

46.7

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

70.7

0.47

0.8

61.4

Minor 5ss

31.8

-2.1

38.6

46.5

Minor BPS

31.1

-1.6

2.6

32.24

40.9

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236