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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3786263_3786343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3786263 - 3786343

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCCG

5'SS Class:

major

3'SS Sequence:

CTCTGCCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

GTGTCATTGAGG

Flanking Amino Acid:

TFEHLDLETELFFGGVIDQD

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

62.3

43.9

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

74.1

0.54

0.8

36.4

Minor 5ss

27.7

-2.6

2.9

32.5

42.3

Minor BPS

48.6

-0.2

56.45

44.9

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236