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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3786488_3786889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3786488 - 3786889

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCAGCCC

5'SS Class:

major

3'SS Sequence:

TGGCCACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

CATCCCTCACCG

Flanking Amino Acid:

RHRRSNIRFEGSVGHYCQDQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.1

40.1

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

62.9

0.29

0.9

55.2

35.3

Minor 5ss

24.9

-2.9

3.3

33.6

41.9

Minor BPS

-0.2

1.9

54.44

46.1

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236