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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3787391_3787476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3787391 - 3787476

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGCA

5'SS Class:

major

3'SS Sequence:

CCGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TGCCGCTCACCC

Flanking Amino Acid:

LRTGSQYFFGGCPKPASLTG

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

38.8

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

72.7

0.51

0.9

65.1

36.3

Minor 5ss

29.8

-2.3

3.4

38.3

46.9

Minor BPS

42.7

-0.5

2.1

52.77

44.6

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236