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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3787649_3787713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3787649 - 3787713

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGCT

5'SS Class:

major

3'SS Sequence:

TCTGCGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCAAA

U12 Branch Point Sequence:

GGGACCCAAACC

Flanking Amino Acid:

VFFNVCGITDRCTPNLCEHD

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

40.9

Major BPS

46.5

-0.2

1.2

50.7

31.8

Major PPT

68.1

0.41

0.9

38.5

Minor 5ss

30.9

-2.2

3.7

48.2

47.4

Minor BPS

45.3

-0.3

53.69

43.3

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236