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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3787821_3787918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3787821 - 3787918

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCGCA

5'SS Class:

major

3'SS Sequence:

TTCCCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTCTCTCCATCC

Flanking Amino Acid:

TGYKGETCHKSLYKESCDAY

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

64.1

35.9

Major BPS

64.7

0.37

1.3

74.7

Major PPT

84.7

0.78

0.7

76.7

Minor 5ss

33.6

-1.9

3.4

43.3

44.1

Minor BPS

46.3

-0.3

2.1

63.02

42.7

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236