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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3788039_3788154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3788039 - 3788154

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGCA

5'SS Class:

major

3'SS Sequence:

CCCTGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTCTCCTGACAC

Flanking Amino Acid:

KPFTVYCDIREDRAWTIIRH

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

38.8

Major BPS

68.9

0.47

59.2

39.1

Major PPT

72.6

0.51

0.8

65.1

30.7

Minor 5ss

29.8

-2.3

3.4

38.3

46.9

Minor BPS

0.11

1.9

68.51

42.7

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236