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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3788822_3789244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3788822 - 3789244

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CTGCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CACCTCTCACCC

Flanking Amino Acid:

LLGPLRCYGDRNTWNTVSFN

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

57.9

41.8

Major BPS

72.7

0.56

30.1

Major PPT

71.7

0.49

0.8

64.9

30.8

Minor 5ss

29.5

-2.4

3.1

39.8

Minor BPS

44.4

-0.4

1.8

48.46

41.5

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236