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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3789413_3789485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3789413 - 3789485

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

CGCGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGGAT

U12 Branch Point Sequence:

CCTGCCGACACC

Flanking Amino Acid:

SRYYVRVELNTTRDVVFAYD

Intron Amino Acid Position:

762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.1

51.9

39.4

Major BPS

44.5

-0.3

1.4

38.4

41.7

Major PPT

65.2

0.34

0.9

57.7

33.3

Minor 5ss

30.6

-2.2

3.7

43.6

44.9

Minor BPS

38.5

-0.9

2.5

48.88

47.8

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236