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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3790350_3790433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790350 - 3790433

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGTC

5'SS Class:

major

3'SS Sequence:

GCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

GGCGCTGCAGCC

Flanking Amino Acid:

DYMAVLIKDDGSLQLRYQLG

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

69.1

35.6

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

28.5

-2.5

3.6

37.5

41.8

Minor BPS

35.6

-1.1

2.1

39.48

39.9

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236