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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3790562_3790646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790562 - 3790646

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

GCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACGC

Flanking Amino Acid:

TRLHRTLYTQVDYLPVMEQQ

Intron Amino Acid Position:

1037

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

66.8

0.38

0.8

57.1

33.4

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

38.7

-0.8

2.2

44.37

43.4

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236