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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3790741_3790831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790741 - 3790831

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTGG

5'SS Class:

major

3'SS Sequence:

TGTGCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

TGGGGCTGAGCC

Flanking Amino Acid:

PKNLYLGRVMETGMIDPEIQ

Intron Amino Acid Position:

1068

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

56.7

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

69.8

0.45

0.9

62.5

34.6

Minor 5ss

37.4

-1.4

38.2

46.7

Minor BPS

42.5

-0.5

2.1

51.8

45.1

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236