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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3791066_3791215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3791066 - 3791215

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

TCCCACCCACCC

Flanking Amino Acid:

PEMDPWYMGTEFPHVHDDGW

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

37.7

-0.9

45.87

42.5

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236