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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3791264_3791366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3791264 - 3791366

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

GCCCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCG

Flanking Amino Acid:

DDGWIGIIIGFVTFLLLLLG

Intron Amino Acid Position:

1162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

68.8

36.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

68.2

0.41

0.8

61.3

29.1

Minor 5ss

-1.7

3.3

44.3

43.6

Minor BPS

47.5

-0.3

52.75

47.6

Associated Gene:

Gene:

CNTNAP1

Ensembl Gene ID:

ENSAPLG00000014030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014657

3784267 - 3792502

8236