Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3798732_3799184_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3798732 - 3799184

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTGGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTTTTTTTGGTA

Flanking Amino Acid:

RLLGTKTCKQVFQFAVKESL

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.1

41.4

Major BPS

75.1

0.62

65.6

Major PPT

0.79

0.8

84.9

29.9

Minor 5ss

38.1

-1.3

3.2

51.2

45.5

Minor BPS

45.7

-0.3

3.4

72.69

33.6

Associated Gene:

Gene:

EZH1

Ensembl Gene ID:

ENSAPLG00000013797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014466

3793713 - 3805566

11854