Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3800380_3801167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3800380 - 3801167

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

GTTATTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TCACTGTTATTT

Flanking Amino Acid:

RCFKYDCFLHPFHATPNVYK

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

0.83

0.8

84.7

35.8

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

44.6

-0.3

2.2

61.23

43.2

Associated Gene:

Gene:

EZH1

Ensembl Gene ID:

ENSAPLG00000013797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014466

3793713 - 3805566

11854