Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3803350_3804408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3803350 - 3804408

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTACA

5'SS Class:

major

3'SS Sequence:

GATCTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GGTTACCGAACC

Flanking Amino Acid:

SWSPLQQNFMVEDETVLCNI

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.3

37.4

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

71.6

0.49

64.8

Minor 5ss

34.8

-1.7

2.9

39.8

40.9

Minor BPS

48.2

-0.1

63.53

40.7

Associated Gene:

Gene:

EZH1

Ensembl Gene ID:

ENSAPLG00000013797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014466

3793713 - 3805566

11854