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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3838660_3843270_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3838660 - 3843270

Intron Length:

4611

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCTAAAGTG

5'SS Class:

weak_major

3'SS Sequence:

GGCGGTGGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCCTCCCCATTG

Flanking Amino Acid:

VKFYHGLLNRCGKRRRGKMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.5

57.8

43.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

41.1

-0.5

1.7

32.9

40.5

Minor 5ss

21.9

-3.2

4.1

35.2

41.3

Minor BPS

39.8

-0.9

39.51

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022159

3837965 - 3843337

5373