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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3844860_3845040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3844860 - 3845040

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CCTCCTGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TCCTTTATAACC

Flanking Amino Acid:

TNVFNATFHIWHSGQFGTIN

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

62.2

43.7

Major BPS

77.9

0.69

78.3

31.3

Major PPT

73.4

0.53

0.9

67.7

32.2

Minor 5ss

30.2

-2.3

3.2

35.3

42.3

Minor BPS

57.9

0.23

1.6

66.02

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004683

3843062 - 3847134

4073