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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3845608_3845908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3845608 - 3845908

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

GGCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAT

U12 Branch Point Sequence:

GTTGCGGTGATG

Flanking Amino Acid:

NITENECQNYKRCLEILEQM

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

40.1

Major BPS

53.7

0.09

1.4

46.5

Major PPT

67.1

0.39

58.4

38.4

Minor 5ss

-1.6

2.9

43.3

38.2

Minor BPS

40.2

-0.9

2.6

50.4

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004683

3843062 - 3847134

4073