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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3846046_3846280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3846046 - 3846280

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

GGGCACGGAATT

Flanking Amino Acid:

TMENLSRRLKVTGDLFDIMS

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

90.4

25.2

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

76.4

0.59

0.9

70.5

35.2

Minor 5ss

24.1

-3

40.6

45.6

Minor BPS

40.2

-0.6

2.1

53.18

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004683

3843062 - 3847134

4073