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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3846719_3846816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3846719 - 3846816

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

AGTAACGGCACC

Flanking Amino Acid:

QEEESSALSEEGFAESRQDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.2

42.1

Major BPS

54.4

0.11

1.2

36.4

Major PPT

74.6

0.55

0.7

24.8

Minor 5ss

27.5

-2.6

3.6

38.1

46.8

Minor BPS

36.4

-1

2.4

48.51

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004683

3843062 - 3847134

4073