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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3846888_3846998_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3846888 - 3846998

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACCGGCA

5'SS Class:

weak_major

3'SS Sequence:

CTCGCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CTCGCCCCCACA

Flanking Amino Acid:

LDRLTIQELTAPLLTAAPAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

49.1

41.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

68.4

0.42

0.8

60.8

29.4

Minor 5ss

34.5

-1.8

3.7

47.2

48.3

Minor BPS

40.9

-0.7

2.2

51.63

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004683

3843062 - 3847134

4073