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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3851883_3852129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3851883 - 3852129

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GGCCGCTCAGCC

Flanking Amino Acid:

VSKIAKYPHVEDYRRTVTEI

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

78.9

0.65

0.8

73.1

31.8

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

40.6

-0.7

45.91

42.2

Associated Gene:

Gene:

PSME3

Ensembl Gene ID:

ENSAPLG00000030012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031303

3847565 - 3852737

5173