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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3876136_3876295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3876136 - 3876295

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGT

5'SS Class:

major

3'SS Sequence:

GTCGTTACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTGTCGTTACTG

Flanking Amino Acid:

PVEAVENLGPRVAELLGGKG

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

61.5

45.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

73.2

0.52

0.9

66.4

39.5

Minor 5ss

42.9

-0.8

3.5

65.1

46.1

Minor BPS

46.4

-0.4

2.3

54.19

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034722

3875904 - 3879647

3744

ENSAPLT00000004244

3875904 - 3881382

5479