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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3876391_3876878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3876391 - 3876878

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCTAT

U12 Branch Point Sequence:

TATTCTGGAGCA

Flanking Amino Acid:

NIIANEIGTEETLLFLTVGD

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

50.9

0.02

1.4

50.5

44.9

Major PPT

77.6

0.62

0.8

71.8

32.8

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

46.4

-0.2

2.2

65.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034722

3875904 - 3879647

3744

ENSAPLT00000004244

3875904 - 3881382

5479