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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3877626_3877783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3877626 - 3877783

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGGA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

TCTCCATTCACT

Flanking Amino Acid:

LQSSVKLLQKNNLNLLRDIA

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

69.9

0.5

31.5

Major PPT

87.4

0.84

0.7

85.1

28.9

Minor 5ss

34.7

-1.7

3.5

46.6

48.7

Minor BPS

56.7

0.29

2.1

78.66

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034722

3875904 - 3879647

3744

ENSAPLT00000004244

3875904 - 3881382

5479