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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3877851_3878027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3877851 - 3878027

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATACCC

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

TAAGTATCAATT

Flanking Amino Acid:

NTEKALTSLLKNGPGEHVEA

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

59.1

38.4

Major BPS

69.1

0.47

1.2

34.1

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

-1.7

3.1

44.7

36.5

Minor BPS

46.7

-0.1

1.8

63.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034722

3875904 - 3879647

3744

ENSAPLT00000004244

3875904 - 3881382

5479