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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3878757_3879111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3878757 - 3879111

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CTCATCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ATTTCCTCATCC

Flanking Amino Acid:

DLMFGFKTTSWELGRQRSII

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.4

44.7

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

72.1

0.5

0.9

65.9

34.8

Minor 5ss

33.5

-1.9

2.8

36.6

41.8

Minor BPS

64.5

0.43

1.8

77.44

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034722

3875904 - 3879647

3744