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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3879170_3879631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3879170 - 3879631

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGTGCC

5'SS Class:

major

3'SS Sequence:

ACATCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TGTCCAAAACTC

Flanking Amino Acid:

RRFDHMQQHSGQHLITAIAD

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

68.5

37.7

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

75.6

0.58

0.9

66.1

Minor 5ss

28.3

-2.5

3.1

36.6

40.4

Minor BPS

38.1

-0.9

2.1

50.77

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004244

3875904 - 3881382

5479