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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3879792_3880352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3879792 - 3880352

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCATCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGACCCCCATCT

Flanking Amino Acid:

TILFPEGGGQPDDRGLIGDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

61.3

0.28

52.7

34.2

Major PPT

71.2

0.48

0.8

64.6

30.7

Minor 5ss

37.8

-1.4

3.1

48.3

47.5

Minor BPS

44.7

-0.3

2.1

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004244

3875904 - 3881382

5479