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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3880476_3880567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3880476 - 3880567

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTAACG

5'SS Class:

major

3'SS Sequence:

CTCTTTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCGTCCCTCACG

Flanking Amino Acid:

QCQRDSWARQFATKVVSCQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

61.9

42.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

84.4

0.77

0.8

79.6

32.4

Minor 5ss

32.5

-2

3.1

41.2

44.9

Minor BPS

46.7

-0.4

2.2

51.3

48.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004244

3875904 - 3881382

5479