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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3885450_3885714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3885450 - 3885714

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGTGCT

5'SS Class:

major

3'SS Sequence:

ACTCTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TGGTGTGAAACT

Flanking Amino Acid:

DLEMFINFIQDEVGSPGKAE

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.3

69.9

39.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.1

0.72

0.8

73.3

36.5

Minor 5ss

30.3

-2.3

3.1

34.3

41.1

Minor BPS

42.2

-0.5

2.5

63.58

Associated Gene:

Gene:

RUNDC1

Ensembl Gene ID:

ENSAPLG00000022366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027890

3883356 - 3887961

4606