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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3885823_3886288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3885823 - 3886288

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTAACCTGATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTTTCTAACCT

Flanking Amino Acid:

KPNTRSSGSRVNPEDARKMR

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

60.7

0.24

1.1

41.4

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

64.1

0.52

1.9

86.99

39.2

Associated Gene:

Gene:

RUNDC1

Ensembl Gene ID:

ENSAPLG00000022366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027890

3883356 - 3887961

4606