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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3888550_3889136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3888550 - 3889136

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTGCTCTCATCC

Flanking Amino Acid:

VYNYNHLMPTRYSVDIPLDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

74.5

0.55

0.9

66.1

39.9

Minor 5ss

-2.5

33.4

41.6

Minor BPS

46.6

-0.2

1.8

55.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004204

3888084 - 3890038

1955