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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3893206_3893392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3893206 - 3893392

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGCAT

U12 Branch Point Sequence:

GCTGCTGCAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

43.3

-0.4

1.5

47.7

45.7

Major PPT

77.9

0.63

0.8

69.6

36.7

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

38.2

-0.9

2.2

46.58

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037425

3892686 - 3899386

6701

ENSAPLT00000037060

3893099 - 3899722

6624