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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3894528_3895417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3894528 - 3895417

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCGAGG

5'SS Class:

major

3'SS Sequence:

TGTCTACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GCTTTCTTACTC

Flanking Amino Acid:

AHVVELSPDEIFVCASMVVD

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.36

1.3

55.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

77.6

0.62

0.9

70.7

Minor 5ss

35.8

-1.6

3.4

48.3

47.5

Minor BPS

60.1

0.3

1.6

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037425

3892686 - 3899386

6701

ENSAPLT00000037060

3893099 - 3899722

6624