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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3898340_3898656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3898340 - 3898656

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

GTCTTGTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTGTTTATAATG

Flanking Amino Acid:

TYTIPDGVQGVGHPHPGQPY

Intron Amino Acid Position:

1280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

67.1

44.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

67.1

0.38

1.1

70.8

Minor 5ss

34.2

-1.8

36.5

40.8

Minor BPS

56.4

0.06

1.6

63.19

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037060

3893099 - 3899722

6624

ENSAPLT00000037425

3892686 - 3899386

6701