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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3898866_3899316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3898866 - 3899316

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCG

5'SS Class:

major

3'SS Sequence:

TTCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

ATTTACACCACT

Flanking Amino Acid:

HKTSWHGSKARNGYPDAQYL

Intron Amino Acid Position:

1349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

59.6

44.8

Major BPS

72.8

0.57

30.3

Major PPT

75.5

0.57

0.8

68.9

31.7

Minor 5ss

37.2

-1.5

3.2

47.9

47.8

Minor BPS

45.2

-0.2

2.3

73.12

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037425

3892686 - 3899386

6701

ENSAPLT00000037060

3893099 - 3899722

6624